Pseudomonas poae RE_1-1-14, H045_21380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0051536 | iron-sulfur cluster binding |
Inferred from Sequence Model
Term mapped from: InterPro:SFLDS00029
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SFLDS00029
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01335 | Radical_SAM | - | - | 67 | 226 | 5.9187E-10 |
| PANTHER | PTHR43432 | SLR0285 PROTEIN | IPR040086 | Protein MJ0683-like | 40 | 334 | 1.5E-103 |
| SUPERFAMILY | SSF102114 | Radical SAM enzymes | - | - | 46 | 268 | 1.96E-10 |
| SFLD | SFLDG01084 | Uncharacterised Radical SAM Subgroup 2 | IPR040086 | Protein MJ0683-like | 38 | 332 | 0.0 |
| Gene3D | G3DSA:3.80.30.30 | - | - | - | 107 | 305 | 3.0E-26 |
| SMART | SM00729 | MiaB | IPR006638 | Elp3/MiaA/NifB-like, radical SAM core domain | 63 | 288 | 8.3E-4 |
| SFLD | SFLDS00029 | Radical SAM | IPR007197 | Radical SAM | 38 | 332 | 0.0 |
| Pfam | PF04055 | Radical SAM superfamily | IPR007197 | Radical SAM | 67 | 244 | 9.4E-14 |
| NCBIfam | NF033668 | NCBIFAM: PA0069 family radical SAM protein | - | - | 8 | 351 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.