Pseudomonas poae RE_1-1-14, H045_21505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00304
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00304
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppz02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 526 540 5.0E-19
CDD cd06225 HAMP - - 200 242 3.46544E-9
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 375 443 1.2E-16
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 581 594 5.0E-19
PANTHER PTHR44936 SENSOR PROTEIN CREC - - 4 594 1.8E-84
FunFam G3DSA:3.30.565.10:FF:000023 PAS domain-containing sensor histidine kinase - - 446 595 6.7E-39
Gene3D G3DSA:1.20.120.880 Histidine kinase (KinB), sensor domain IPR038320 KinB, N-terminal domain superfamily 37 168 1.9E-46
CDD cd19409 KinB_sensor IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 45 157 4.05693E-34
Pfam PF08448 PAS fold IPR013656 PAS fold-4 264 370 1.3E-12
SMART SM00304 HAMP_11 IPR003660 HAMP domain 195 247 2.1E-11
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 489 595 1.1E-32
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 360 443 3.92E-16
SUPERFAMILY SSF158472 HAMP domain-like - - 195 244 1.07E-7
Gene3D G3DSA:1.10.287.130 - - - 368 442 2.1E-15
CDD cd00130 PAS IPR000014 PAS domain 267 366 5.79954E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 557 575 5.0E-19
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 257 373 1.4E-12
Gene3D G3DSA:1.10.8.500 HAMP domain in histidine kinase - - 194 245 2.7E-7
Pfam PF00672 HAMP domain IPR003660 HAMP domain 193 244 1.8E-10
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 490 595 6.3E-25
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 251 367 7.68E-15
CDD cd00075 HATPase - - 494 593 6.48823E-35
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 376 443 1.3E-11
Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 39 158 1.5E-30
Gene3D G3DSA:3.30.450.20 PAS domain - - 246 367 9.8E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 544 554 5.0E-19
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 448 595 4.4E-46
SMART SM00091 pas_2 IPR000014 PAS domain 258 323 1.1E-6
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 373 439 2.01358E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 432 595 1.31E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.