Pseudomonas denitrificans ATCC 13867, H681_03860

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pdr03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	349	441	2.3E-29
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	208	339	7.2E-11
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	5	152	2.8E-23
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	643	661	2.9E-33
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	672	690	2.9E-33
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	165	520	3.19E-72
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	547	763	1.1E-67
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	705	719	2.9E-33
Coils	Coil	Coil	-	-	484	504	-
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	155	347	8.2E-86
Coils	Coil	Coil	-	-	417	437	-
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	203	348	1.2E-10
Coils	Coil	Coil	-	-	442	469	-
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	21	846	0.0
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	348	541	3.0E-46
Gene3D	G3DSA:1.10.8.60	-	-	-	766	856	2.0E-8
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	598	616	2.9E-33
Coils	Coil	Coil	-	-	560	580	-
CDD	cd00009	AAA	-	-	188	339	3.2676E-18
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	765	857	3.0E-6
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	848	0.0
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	768	838	3.2E-9
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	594	738	4.1E-8
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	17	122	1.12E-10
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	543	832	2.83E-57
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	547	763	1.3E-82
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	155	347	6.7E-72
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	562	763	1.25953E-83
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	594	759	2.4E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.