Pseudomonas denitrificans ATCC 13867, H681_07380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0047661 amino-acid racemase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.1860
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006807 nitrogen compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0036361 racemase activity, acting on amino acids and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01054 Nonribosomal peptide structures 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01177 Asp/Glu/Hydantoin racemase IPR015942 Asp/Glu/hydantoin racemase 7 224 1.0E-40
NCBIfam TIGR00035 JCVI: amino acid racemase IPR004380 Aspartate racemase 1 229 3.1E-73
PANTHER PTHR21198 GLUTAMATE RACEMASE - - 2 226 6.6E-39
SUPERFAMILY SSF53681 Aspartate/glutamate racemase IPR001920 Asp/Glu racemase 119 228 8.18E-33
Gene3D G3DSA:3.40.50.1860 - IPR001920 Asp/Glu racemase 104 215 1.8E-96
Gene3D G3DSA:3.40.50.1860 - IPR001920 Asp/Glu racemase 4 224 1.8E-96
SUPERFAMILY SSF53681 Aspartate/glutamate racemase IPR001920 Asp/Glu racemase 1 116 4.9E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.