Pseudomonas denitrificans ATCC 13867, H681_07790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR45566 HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED - - 2 211 5.6E-63
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 178 5.38E-26
CDD cd17535 REC_NarL-like - - 6 123 8.38482E-35
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 183 195 2.6E-11
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 153 206 6.56429E-18
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 153 167 2.6E-11
Gene3D G3DSA:3.40.50.2300 - - - 5 211 3.0E-51
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 4 119 1.1E-18
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 6 120 2.0E-21
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 152 206 2.4E-18
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 167 183 2.6E-11
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 150 207 1.3E-23
FunFam G3DSA:3.40.50.2300:FF:000179 Transcriptional regulator, LuxR family - - 5 211 1.9E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.