Pseudomonas denitrificans ATCC 13867, H681_07900 (cysM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006535 cysteine biosynthetic process from serine
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004124 cysteine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 10 297 1.4E-93
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 42 149 3.1E-43
FunFam G3DSA:3.40.50.1100:FF:000029 Cysteine synthase - - 150 293 1.6E-73
NCBIfam TIGR01138 JCVI: cysteine synthase B IPR005858 Cysteine synthase CysM 7 296 0.0
CDD cd01561 CBS_like - - 13 292 0.0
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 39 157 1.1E-111
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 6 292 7.86E-90
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 9 285 2.2E-66
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 8 292 1.1E-111
NCBIfam TIGR01136 JCVI: cysteine synthase IPR005856 Cysteine synthase 9 296 4.2E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.