Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 81 | 1.36E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 30 | 40 | 3.6E-8 |
CDD | cd08415 | PBP2_LysR_opines_like | IPR037424 | Regulatory protein NocR, PBP2 domain | 96 | 288 | 7.03774E-57 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 19 | 30 | 3.6E-8 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 81 | 4.6E-21 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 90 | 292 | 2.1E-35 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 62 | 3.4E-18 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 293 | 4.65E-34 |
PANTHER | PTHR30427 | TRANSCRIPTIONAL ACTIVATOR PROTEIN LYSR | - | - | 1 | 299 | 1.4E-101 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 94 | 298 | 6.0E-32 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 40 | 51 | 3.6E-8 |