Pseudomonas denitrificans ATCC 13867, H681_15640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01414
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01414 JCVI: outer membrane autotransporter barrel domain IPR006315 Outer membrane autotransporter barrel domain 1006 1472 1.9E-106
Pfam PF18883 Autochaperone Domain Type 1 IPR043990 Autochaperone domain type 1 994 1098 1.3E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 1101 1152 -
SUPERFAMILY SSF103515 Autotransporter IPR036709 Autotransporter beta-domain superfamily 1162 1472 1.44E-47
SUPERFAMILY SSF101447 Formin homology 2 domain (FH2 domain) - - 1140 1150 8.11E-5
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 614 1115 4.39E-32
Pfam PF03797 Autotransporter beta-domain IPR005546 Autotransporter beta-domain 1201 1450 5.5E-43
PANTHER PTHR12338 AUTOTRANSPORTER - - 1219 1472 1.6E-30
CDD cd01344 PL2_Passenger_AT IPR043990 Autochaperone domain type 1 969 1117 5.76754E-40
SMART SM00869 Autotransporter_2 IPR005546 Autotransporter beta-domain 1198 1461 3.2E-40
Gene3D G3DSA:2.40.128.130 - IPR036709 Autotransporter beta-domain superfamily 1153 1472 1.6E-91
MobiDBLite mobidb-lite consensus disorder prediction - - 1115 1152 -
Gene3D G3DSA:2.160.20.20 - IPR012332 Autotransporter, pectate lyase C-like domain superfamily 589 1120 2.2E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.