Pseudomonas denitrificans ATCC 13867, H681_17815 (ruvC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004520	endodeoxyribonuclease activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02075	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006310	DNA recombination	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02075	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:3.30.420.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02075	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pdr03440	Homologous recombination	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00696	Crossover junction endodeoxyribonuclease RUVC signature	IPR002176	Crossover junction endodeoxyribonuclease RuvC	107	126	3.8E-40
PRINTS	PR00696	Crossover junction endodeoxyribonuclease RUVC signature	IPR002176	Crossover junction endodeoxyribonuclease RuvC	83	99	3.8E-40
PRINTS	PR00696	Crossover junction endodeoxyribonuclease RUVC signature	IPR002176	Crossover junction endodeoxyribonuclease RuvC	5	18	3.8E-40
CDD	cd16962	RuvC	IPR002176	Crossover junction endodeoxyribonuclease RuvC	4	153	1.88487E-66
Pfam	PF02075	Crossover junction endodeoxyribonuclease RuvC	IPR002176	Crossover junction endodeoxyribonuclease RuvC	4	150	9.6E-65
SUPERFAMILY	SSF53098	Ribonuclease H-like	IPR012337	Ribonuclease H-like superfamily	3	156	1.67E-51
PRINTS	PR00696	Crossover junction endodeoxyribonuclease RUVC signature	IPR002176	Crossover junction endodeoxyribonuclease RuvC	61	77	3.8E-40
PANTHER	PTHR30194	CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASE RUVC	IPR002176	Crossover junction endodeoxyribonuclease RuvC	2	157	4.1E-60
Gene3D	G3DSA:3.30.420.10	-	IPR036397	Ribonuclease H superfamily	2	158	1.6E-52
NCBIfam	TIGR00228	JCVI: crossover junction endodeoxyribonuclease RuvC	IPR002176	Crossover junction endodeoxyribonuclease RuvC	4	155	4.5E-60
FunFam	G3DSA:3.30.420.10:FF:000002	Crossover junction endodeoxyribonuclease RuvC	-	-	2	158	3.5E-63
PRINTS	PR00696	Crossover junction endodeoxyribonuclease RUVC signature	IPR002176	Crossover junction endodeoxyribonuclease RuvC	138	150	3.8E-40
Hamap	MF_00034	Crossover junction endodeoxyribonuclease RuvC [ruvC].	IPR002176	Crossover junction endodeoxyribonuclease RuvC	2	153	45.891357

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.