Pseudomonas aeruginosa LESB58, PALES_29171 (pvdQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009392 N-acetyl-anhydromuramoyl-L-alanine amidase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2385
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16495538
Molecular Function GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001227
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01804
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017000 antibiotic biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01804
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pyoverdine synthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001227 Pen_acylase IPR014395 Penicillin/GL-7-ACA/AHL acylase 10 153 5.5E-14
Gene3D G3DSA:2.30.120.10 - IPR043146 Penicillin amidase type, N-terminal domain, B-knob 292 366 0.0
FunFam G3DSA:1.10.439.10:FF:000003 Acyl-homoserine lactone acylase PvdQ - - 24 193 9.2E-118
Pfam PF01804 Penicillin amidase IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase 33 750 0.0
SUPERFAMILY SSF56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) IPR029055 Nucleophile aminohydrolases, N-terminal 33 756 0.0
Gene3D G3DSA:1.10.1400.10 - IPR043147 Penicillin amidase type, A-knob 509 690 0.0
PANTHER PTHR34218 PEPTIDASE S45 PENICILLIN AMIDASE IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase 5 760 0.0
Gene3D G3DSA:1.10.439.10 Penicillin Amidohydrolase, domain 1 IPR023343 Penicillin amidase type, domain 1 25 192 4.8E-61
CDD cd01936 Ntn_CA - - 35 744 0.0
PIRSF PIRSF001227 Pen_acylase IPR014395 Penicillin/GL-7-ACA/AHL acylase 177 759 9.4E-55
Gene3D G3DSA:3.60.20.10 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 IPR029055 Nucleophile aminohydrolases, N-terminal 217 748 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.