Pseudomonas aeruginosa LESB58, PALES_33971
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | NF040716 | NCBIFAM: 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO | - | - | 10 | 583 | 0.0 |
| Pfam | PF02624 | YcaO cyclodehydratase, ATP-ad Mg2+-binding | IPR003776 | YcaO-like domain | 65 | 400 | 6.2E-73 |
| Gene3D | G3DSA:3.30.1330.230 | - | - | - | 164 | 276 | 3.7E-9 |
| NCBIfam | TIGR03549 | JCVI: OsmC domain/YcaO domain-containing protein | IPR019938 | YcaO domain protein | 4 | 587 | 0.0 |
| NCBIfam | TIGR00702 | JCVI: YcaO-type kinase domain | IPR003776 | YcaO-like domain | 19 | 411 | 7.0E-95 |
| Pfam | PF18381 | YcaO cyclodehydratase C-terminal domain | IPR041080 | YcaO cyclodehydratase, C-terminal | 417 | 588 | 9.2E-73 |
| PANTHER | PTHR39624 | PROTEIN INVOLVED IN RIMO-MEDIATED BETA-METHYLTHIOLATION OF RIBOSOMAL PROTEIN S12 YCAO | - | - | 8 | 587 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.