Pseudomonas aeruginosa LESB58, PALES_52561
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF01258
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR00618 | DksA/TraR zinc finger signature | IPR020460 | Zinc finger, DksA/TraR C4-type, bacteria | 51 | 63 | 4.2E-5 |
| PRINTS | PR00618 | DksA/TraR zinc finger signature | IPR020460 | Zinc finger, DksA/TraR C4-type, bacteria | 39 | 50 | 4.2E-5 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | - | - | 38 | 73 | 3.56E-8 |
| FunFam | G3DSA:1.20.120.910:FF:000002 | DksA/TraR family C4-type zinc finger protein | - | - | 6 | 73 | 4.2E-39 |
| Gene3D | G3DSA:1.20.120.910 | - | - | - | 6 | 76 | 1.9E-10 |
| Pfam | PF01258 | Prokaryotic dksA/traR C4-type zinc finger | IPR000962 | Zinc finger, DksA/TraR C4-type | 37 | 69 | 3.8E-13 |
| PANTHER | PTHR38777 | FELS-2 PROPHAGE PROTEIN | - | - | 1 | 79 | 1.5E-33 |
| NCBIfam | TIGR02419 | JCVI: phage/conjugal plasmid C-4 type zinc finger protein, TraR family | IPR012783 | Zinc finger, C4 DksA/TraR-type | 12 | 66 | 2.2E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.