Pseudomonas aeruginosa LESB58, PALES_58461 (wzm)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015920 lipopolysaccharide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5451
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9244257
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01061
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00164
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01061
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00164
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other LESB58 genes in this class
Transport of small molecules Other LESB58 genes in this class
Cell wall / LPS / capsule Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 35 56 4.6E-6
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 146 170 4.6E-6
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 183 202 4.6E-6
PANTHER PTHR30413 INNER MEMBRANE TRANSPORT PERMEASE - - 5 265 1.4E-72
Pfam PF01061 ABC-2 type transporter IPR013525 ABC-2 type transporter, transmembrane domain 20 225 9.2E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.