Pseudomonas aeruginosa LESB58, PALES_58491 (rmd)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009103 | lipopolysaccharide biosynthetic process |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5454
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
9781879 |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCAP | Lipopolysaccharide biosynthesis |
ECO:0000037
not_recorded |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF16363 | GDP-mannose 4,6 dehydratase | IPR016040 | NAD(P)-binding domain | 36 | 291 | 4.3E-50 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 3 | 299 | 8.06E-68 |
| PANTHER | PTHR43000 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED | - | - | 3 | 299 | 4.2E-45 |
| Gene3D | G3DSA:3.90.25.10 | - | - | - | 167 | 291 | 3.4E-75 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 4 | 283 | 3.4E-75 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.