Pseudomonas aeruginosa 2192, PA2G_03793

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5453
 ECO:0000249
sequence similarity evidence used in automatic assertion		 8548534
Biological Process GO:0019673 GDP-mannose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43715
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43715
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. IPR006368 GDP-mannose 4,6-dehydratase 3 322 53.110771
Gene3D G3DSA:3.40.50.720 - - - 6 302 0.0
FunFam G3DSA:3.40.50.720:FF:000924 GDP-mannose 4,6 dehydratase - - 1 208 5.5E-61
CDD cd05260 GDP_MD_SDR_e - - 5 318 0.0
Gene3D G3DSA:3.90.25.10 - - - 186 312 0.0
PANTHER PTHR43715 GDP-MANNOSE 4,6-DEHYDRATASE IPR006368 GDP-mannose 4,6-dehydratase 3 320 1.2E-121
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 6 312 9.6E-123
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 3 319 9.68E-75
NCBIfam TIGR01472 JCVI: GDP-mannose 4,6-dehydratase IPR006368 GDP-mannose 4,6-dehydratase 4 319 8.0E-127

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.