Pseudomonas fluorescens Pf0-1, Pfl01_0938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0938
Name
Replicon chromosome
Genomic location 1089593 - 1091092 (+ strand)

Cross-References

RefSeq YP_346670.1
GI 77457165
Entrez 3715783
INSDC ABA72681.1
NCBI Locus Tag Pfl01_0938
UniParc UPI00003C7278
UniProtKB Acc Q3KHS5
UniProtKB ID Q3KHS5_PSEPF
UniRef100 UniRef100_Q3KHS5
UniRef50 UniRef50_P24126
UniRef90 UniRef90_K9NNN7

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux system outer membrane lipoprotein NodT
Synonyms
Evidence for Translation
Charge (pH 7) -5.61
Kyte-Doolittle Hydrophobicity Value -0.173
Molecular Weight (kDa) 53349.7
Isoelectric Point (pI) 6.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001777 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0938

Human Homologs

References

No references are associated with this feature.