Pseudomonas fluorescens Pf0-1, Pfl01_1206

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_1206
Name
Replicon chromosome
Genomic location 1378188 - 1378952 (- strand)

Cross-References

RefSeq YP_346938.1
GI 77457433
Entrez 3717055
INSDC ABA72949.1
NCBI Locus Tag Pfl01_1206
UniParc UPI0000387C56
UniProtKB Acc Q3KH07
UniProtKB ID Q3KH07_PSEPF
UniRef100 UniRef100_Q3KH07
UniRef50 UniRef50_P39456
UniRef90 UniRef90_E2XMV5

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.13
Kyte-Doolittle Hydrophobicity Value -0.215
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018582 (121 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_1206

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.6e-20
Percent Identity: 34.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.6e-20
Percent Identity: 34.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.6e-20
Percent Identity: 34.1

References

No references are associated with this feature.