Pseudomonas fluorescens Pf0-1, Pfl01_1390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_1390
Name
Replicon chromosome
Genomic location 1563497 - 1564429 (+ strand)

Cross-References

RefSeq YP_347122.1
GI 77457617
Entrez 3717223
INSDC ABA73133.1
NCBI Locus Tag Pfl01_1390
UniParc UPI0000387E4A
UniProtKB Acc Q3KGH3
UniProtKB ID Q3KGH3_PSEPF
UniRef100 UniRef100_Q3KGH3
UniRef50 UniRef50_D7HXF1
UniRef90 UniRef90_W6VYB3

Product

Feature Type CDS
Coding Frame 1
Product Name
D-isomer specific 2-hydroxyacid dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.90
Kyte-Doolittle Hydrophobicity Value 0.016
Molecular Weight (kDa) 34154.9
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001240 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_1390

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 1.6e-08
Percent Identity: 28.7

References

No references are associated with this feature.