Pseudomonas fluorescens Pf0-1, Pfl01_1616
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_1616
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1807240 - 1808676 (+ strand) |
Cross-References
| RefSeq | YP_347348.1 |
| GI | 77457843 |
| EC Number | 1.8.1.4 |
| Entrez | 3716828 |
| NCBI Locus Tag | Pfl01_1616 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
dihydrolipoamide dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.46 |
| Kyte-Doolittle Hydrophobicity Value | 0.143 |
| Molecular Weight (kDa) | 49.8 |
| Isoelectric Point (pI) | 6.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5TR3 | HYDROLASE | 10/25/16 | 2.5 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD. | Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) | 2.5 | X-RAY DIFFRACTION | 94.6 |
| 6AWA | OXIDOREDUCTASE | 09/05/17 | 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD and Adenosine-5'-monophosphate. | Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) | 1.83 | X-RAY DIFFRACTION | 94.6 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003776 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_1616
Search term: dihydrolipoamide dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898]
E-value:
1.2e-119
Percent Identity:
48.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898]
E-value:
1.2e-119
Percent Identity:
48.9
|
References
No references are associated with this feature.