Pseudomonas fluorescens Pf0-1, Pfl01_1856

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_1856
Name
Replicon	chromosome
Genomic location	2113777 - 2115750 (- strand)

Cross-References

RefSeq	YP_347588.1
GI	77458083
Entrez	3716370
INSDC	ABA73599.1
NCBI Locus Tag	Pfl01_1856
UniParc	UPI00003877A1
UniProtKB Acc	Q3KF57
UniProtKB ID	MACB1_PSEPF
UniRef100	UniRef100_Q3KF57
UniRef50	UniRef50_Q4K9A4
UniRef90	UniRef90_Q3KF57

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.90
Kyte-Doolittle Hydrophobicity Value	0.184
Molecular Weight (kDa)	69751.6
Isoelectric Point (pI)	6.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003137 (481 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_1856

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000352135 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.4e-22 Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14	ENSP00000265723 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.4e-22 Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14	ENSP00000496956 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.4e-22 Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14	ENSP00000392983 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.4e-22 Percent Identity: 32.3

References