Pseudomonas fluorescens Pf0-1, Pfl01_2078
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_2078
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2363299 - 2364141 (- strand) |
Cross-References
| RefSeq | YP_347810.1 |
| GI | 77458305 |
| Entrez | 3716049 |
| NCBI Locus Tag | Pfl01_2078 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
silent information regulator protein Sir2
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.29 |
| Kyte-Doolittle Hydrophobicity Value | -0.198 |
| Molecular Weight (kDa) | 30651.7 |
| Isoelectric Point (pI) | 5.85 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001085 (446 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_2078
Search term: silent information regulator protein Sir2
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
sirtuin 4 [Source:HGNC Symbol;Acc:HGNC:14932]
E-value:
8.7e-54
Percent Identity:
41.5
|
References
No references are associated with this feature.