Pseudomonas fluorescens Pf0-1, Pfl01_2680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_2680
Name
Replicon chromosome
Genomic location 3080460 - 3082247 (+ strand)

Cross-References

RefSeq YP_348411.1
GI 77458905
Entrez 3714355
INSDC ABA74421.1
NCBI Locus Tag Pfl01_2680
UniParc UPI00003873AF
UniProtKB Acc Q3KCT4
UniProtKB ID Q3KCT4_PSEPF
UniRef100 UniRef100_Q3KCT4
UniRef50 UniRef50_Q03024
UniRef90 UniRef90_W6VJZ6

Product

Feature Type CDS
Coding Frame 1
Product Name
Type I secretion system ATPase, PrtD
Synonyms
Evidence for Translation
Charge (pH 7) 11.07
Kyte-Doolittle Hydrophobicity Value 0.213
Molecular Weight (kDa) 63826.5
Isoelectric Point (pI) 9.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001198 (779 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_2680

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value: 2.7e-36
Percent Identity: 32.7

References

No references are associated with this feature.