Pseudomonas fluorescens Pf0-1, Pfl01_2794
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_2794
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3218775 - 3220193 (- strand) |
Cross-References
| RefSeq | YP_348525.1 |
| GI | 77459019 |
| Entrez | 3714535 |
| NCBI Locus Tag | Pfl01_2794 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
IS4 family transposase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 9.88 |
| Kyte-Doolittle Hydrophobicity Value | -0.515 |
| Molecular Weight (kDa) | 53585.7 |
| Isoelectric Point (pI) | 8.76 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000670 (556 members) |
| Putative Inparalogs |
1 predicted inparalogs IS4 family transposase (Pfl01_0033) 100.0% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_2794
Search term: IS4 family transposase
|
Human Homologs
References
No references are associated with this feature.