Pseudomonas fluorescens Pf0-1, Pfl01_2904

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_2904
Name
Replicon chromosome
Genomic location 3348396 - 3349364 (+ strand)

Cross-References

RefSeq YP_348635.1
GI 77459129
Entrez 3712668
INSDC ABA74645.1
NCBI Locus Tag Pfl01_2904
UniParc UPI00003C738B
UniProtKB Acc Q3KC60
UniProtKB ID Q3KC60_PSEPF
UniRef100 UniRef100_Q3KC60
UniRef50 UniRef50_G8QCF7
UniRef90 UniRef90_A0A0C1WWS2

Product

Feature Type CDS
Coding Frame 1
Product Name
D-isomer specific 2-hydroxyacid dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -4.41
Kyte-Doolittle Hydrophobicity Value 0.002
Molecular Weight (kDa) 35044.0
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003228 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_2904

Human Homologs

Ensembl 110, assembly GRCh38.p14
glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
E-value: 1.4e-47
Percent Identity: 42.1

References

No references are associated with this feature.