Pseudomonas fluorescens Pf0-1, Pfl01_3464

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3464
Name
Replicon chromosome
Genomic location 3948564 - 3949622 (+ strand)

Cross-References

RefSeq YP_349193.1
GI 77459686
EC Number 1.2.4.4
Entrez 3713589
INSDC ABA75202.1
NCBI Locus Tag Pfl01_3464
UniParc UPI0000388333
UniProtKB Acc Q3KAK2
UniProtKB ID Q3KAK2_PSEPF
UniRef100 UniRef100_A0A0C2A8J5
UniRef50 UniRef50_Q5SLR3
UniRef90 UniRef90_P09061

Product

Feature Type CDS
Coding Frame 1
Product Name
branched-chain alpha-keto acid dehydrogenase E1 component
Synonyms
Evidence for Translation
Charge (pH 7) -10.78
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 38.6
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1QS0 OXIDOREDUCTASE 06/24/99 Crystal Structure of Pseudomonas Putida 2-oxoisovalerate Dehydrogenase (Branched-Chain Alpha-Keto Acid Dehydrogenase, E1B) Pseudomonas putida 2.4 X-RAY DIFFRACTION 93.8
2BP7 OXIDOREDUCTASE 04/18/05 New crystal form of the Pseudomonas putida branched-chain dehydrogenase (E1) PSEUDOMONAS PUTIDA 2.9 X-RAY DIFFRACTION 93.5

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002214 (793 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3464

Human Homologs

Ensembl 110, assembly GRCh38.p14
branched chain keto acid dehydrogenase E1 subunit beta [Source:HGNC Symbol;Acc:HGNC:987]
E-value: 1.9e-77
Percent Identity: 45.6
Ensembl 110, assembly GRCh38.p14
branched chain keto acid dehydrogenase E1 subunit beta [Source:HGNC Symbol;Acc:HGNC:987]
E-value: 1.9e-77
Percent Identity: 45.6

References

No references are associated with this feature.