Pseudomonas fluorescens Pf0-1, Pfl01_4048

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_4048
Name
Replicon	chromosome
Genomic location	4572536 - 4573852 (- strand)

Cross-References

RefSeq	YP_349776.1
GI	77460269
Entrez	3713899
INSDC	ABA75785.1
NCBI Locus Tag	Pfl01_4048
UniParc	UPI0000387EFC
UniProtKB Acc	Q3K8W9
UniProtKB ID	Q3K8W9_PSEPF
UniRef100	UniRef100_Q3K8W9
UniRef50	UniRef50_Q3K8W9
UniRef90	UniRef90_Q3K8W9

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.47
Kyte-Doolittle Hydrophobicity Value	-0.053
Molecular Weight (kDa)	48019.1
Isoelectric Point (pI)	5.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001312 (602 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_4048 Search term: ABC transporter-like protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000509702 ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30] E-value: 2.0e-20 Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14	ENSP00000269081 ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30] E-value: 2.0e-20 Percent Identity: 28.9

References