Pseudomonas fluorescens Pf0-1, Pfl01_4288

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4288
Name
Replicon chromosome
Genomic location 4844659 - 4845423 (- strand)

Cross-References

RefSeq YP_350016.1
GI 77460509
Entrez 3713986
INSDC ABA76025.1
NCBI Locus Tag Pfl01_4288
UniParc UPI00003C77A5
UniProtKB Acc Q3K879
UniProtKB ID Q3K879_PSEPF
UniRef100 UniRef100_A0A0C1WMD6
UniRef50 UniRef50_P02915
UniRef90 UniRef90_Q1I6Z0

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.62
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 7.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000859 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4288

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.0e-18
Percent Identity: 31.4

References

No references are associated with this feature.