Pseudomonas fluorescens Pf0-1, Pfl01_4513

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4513
Name
Replicon chromosome
Genomic location 5088734 - 5089372 (+ strand)

Cross-References

RefSeq YP_350241.1
GI 77460734
EC Number 4.2.99.18
Entrez 3717772
INSDC ABA76250.1
NCBI Locus Tag Pfl01_4513
UniParc UPI0000387566
UniProtKB Acc Q3K7K4
UniProtKB ID Q3K7K4_PSEPF
UniRef100 UniRef100_Q3K7K4
UniRef50 UniRef50_P44319
UniRef90 UniRef90_Q4K752

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) 5.77
Kyte-Doolittle Hydrophobicity Value -0.215
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 8.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002149 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4513

Human Homologs

References

No references are associated with this feature.