Pseudomonas fluorescens Pf0-1, Pfl01_4935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_4935
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5560498 - 5563017 (- strand) |
Cross-References
| RefSeq | YP_350663.1 |
| GI | 77461156 |
| Entrez | 3714057 |
| NCBI Locus Tag | Pfl01_4935 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent helicase HrpB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.69 |
| Kyte-Doolittle Hydrophobicity Value | -0.250 |
| Molecular Weight (kDa) | 92503.6 |
| Isoelectric Point (pI) | 6.62 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001718 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_4935
Search term: ATP-dependent helicase HrpB
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DExH-box helicase 34 [Source:HGNC Symbol;Acc:HGNC:16719]
E-value:
2.8e-55
Percent Identity:
33.3
|
References
No references are associated with this feature.