Pseudomonas fluorescens Pf0-1, Pfl01_4987

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4987
Name
Replicon chromosome
Genomic location 5616357 - 5617706 (- strand)

Cross-References

RefSeq YP_350715.1
GI 77461208
Entrez 3714945
INSDC ABA76724.1
NCBI Locus Tag Pfl01_4987
UniParc UPI00005C7CBE
UniProtKB Acc Q3K680
UniProtKB ID Q3K680_PSEPF
UniRef100 UniRef100_A0A0C1ZMU2
UniRef50 UniRef50_P37773
UniRef90 UniRef90_Q4K5E8

Product

Feature Type CDS
Coding Frame 1
Product Name
L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7) -6.52
Kyte-Doolittle Hydrophobicity Value 0.048
Molecular Weight (kDa) 48.2
Isoelectric Point (pI) 6.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001663 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4987

Human Homologs

References

No references are associated with this feature.