Pseudomonas fluorescens Pf0-1, Pfl01_5093 (tuf)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5093
Name
tuf
Replicon chromosome
Genomic location 5722362 - 5723555 (- strand)

Cross-References

RefSeq YP_350821.1
GI 77461314
EC Number 3.6.5.3
Entrez 3716092
NCBI Locus Tag Pfl01_5093

Product

Feature Type CDS
Coding Frame 1
Product Name
elongation factor Tu
Synonyms
Evidence for Translation
Charge (pH 7) -12.75
Kyte-Doolittle Hydrophobicity Value -0.159
Molecular Weight (kDa) 43.5
Isoelectric Point (pI) 5.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4J0Q TRANSLATION 01/31/13 Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) Pseudomonas putida 2.294 X-RAY DIFFRACTION 98.7
4IW3 METAL BINDING PROTEIN/TRANSLATION 01/23/13 Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) Pseudomonas putida 2.697 X-RAY DIFFRACTION 98.7

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001434 (870 members)
Putative Inparalogs 1 predicted inparalogs
elongation factor Tu (Pfl01_5081) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5093
Search term: tuf

Human Homologs

Ensembl 110, assembly GRCh38.p14
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value: 1.2e-130
Percent Identity: 54.7

References

No references are associated with this feature.