Pseudomonas fluorescens Pf0-1, Pfl01_5165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5165
Name
Replicon chromosome
Genomic location 5806458 - 5807354 (+ strand)

Cross-References

RefSeq YP_350893.1
GI 77461386
Entrez 3716931
INSDC ABA76902.1
NCBI Locus Tag Pfl01_5165
UniParc UPI0000387978
UniProtKB Acc Q3K5Q2
UniProtKB ID Q3K5Q2_PSEPF
UniRef100 UniRef100_Q3K5Q2
UniRef50 UniRef50_Q4K4U2
UniRef90 UniRef90_A0A024EDS2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.86
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 33771.0
Isoelectric Point (pI) 8.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000512 (453 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5165

Human Homologs

References

No references are associated with this feature.