Pseudomonas fluorescens Pf0-1, Pfl01_5225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5225
Name
Replicon chromosome
Genomic location 5880918 - 5881895 (- strand)

Cross-References

RefSeq YP_350953.1
GI 77461446
Entrez 3716470
INSDC ABA76962.1
NCBI Locus Tag Pfl01_5225
UniParc UPI00003C7676
UniProtKB Acc Q3K5J2
UniProtKB ID Q3K5J2_PSEPF
UniRef100 UniRef100_J3F0H2
UniRef50 UniRef50_I1EZS2
UniRef90 UniRef90_G8Q2F1

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M19
Synonyms
Evidence for Translation
Charge (pH 7) -8.01
Kyte-Doolittle Hydrophobicity Value -0.203
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 5.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2I5G HYDROLASE 08/24/06 Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 94.8

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004953 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5225
Search term: peptidase M19

Human Homologs

Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 6.0e-22
Percent Identity: 24.7
Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 6.0e-22
Percent Identity: 24.7

References

No references are associated with this feature.