Pseudomonas fluorescens Pf0-1, Pfl01_5240

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_5240
Name
Replicon	chromosome
Genomic location	5895992 - 5897170 (+ strand)

Cross-References

RefSeq	YP_350968.1
GI	77461461
Entrez	3716191
INSDC	ABA76977.1
NCBI Locus Tag	Pfl01_5240
UniParc	UPI00003882F3
UniProtKB Acc	Q3K5H7
UniProtKB ID	Q3K5H7_PSEPF
UniRef100	UniRef100_A0A0C1WF97
UniRef50	UniRef50_G8Q8H8
UniRef90	UniRef90_G8Q2G6

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycine betaine/L-proline transport ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7)	3.28
Kyte-Doolittle Hydrophobicity Value	-0.204
Molecular Weight (kDa)	43.6
Isoelectric Point (pI)	8.13

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004691 (971 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_5240 Search term: glycine betaine/L-proline transport ATP-binding subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000371818 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 7.5e-19 Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14	ENSP00000301732 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 7.5e-19 Percent Identity: 31.9

References