Pseudomonas fluorescens Pf0-1, Pfl01_5417

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5417
Name
Replicon chromosome
Genomic location 6081120 - 6082463 (- strand)

Cross-References

RefSeq YP_351145.1
GI 77461638
Entrez 3714439
INSDC ABA77154.1
NCBI Locus Tag Pfl01_5417
UniParc UPI00003C76C0
UniProtKB Acc Q3K500
UniProtKB ID Q3K500_PSEPF
UniRef100 UniRef100_Q3K500
UniRef50 UniRef50_W6R8G1
UniRef90 UniRef90_Q3K500

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -2.28
Kyte-Doolittle Hydrophobicity Value -0.450
Molecular Weight (kDa) 48196.0
Isoelectric Point (pI) 5.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000288 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5417

Human Homologs

References

No references are associated with this feature.