Pseudomonas fluorescens F113, PSF113_0008 (hdtS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0008
Name
hdtS
Replicon chromosome
Genomic location 11203 - 11982 (- strand)

Cross-References

RefSeq YP_005205437.1
GI 378947949
Entrez 11833516
INSDC AEV60042.1
NCBI Locus Tag PSF113_0008
UniParc UPI00000BECC5
UniProtKB Acc G8PW50
UniProtKB ID G8PW50_PSEFL
UniRef100 UniRef100_G8PW50
UniRef50 UniRef50_Q9I7C1
UniRef90 UniRef90_A0A0A1HYL6

Product

Feature Type CDS
Coding Frame 1
Product Name
HdtS, LptA
Synonyms
Evidence for Translation
Charge (pH 7) 8.59
Kyte-Doolittle Hydrophobicity Value 0.133
Molecular Weight (kDa) 29064.7
Isoelectric Point (pI) 9.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 459 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000005 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0008
Search term: hdtS
Search term: HdtS, LptA

Human Homologs

Ensembl 97, assembly GRCh38.p12
1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
E-value: 2.3e-17
Percent Identity: 33.1
Ensembl 97, assembly GRCh38.p12
1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
E-value: 2.3e-17
Percent Identity: 33.1

References

No references are associated with this feature.