Pseudomonas fluorescens F113, PSF113_0062

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0062
Name
Replicon chromosome
Genomic location 68663 - 69322 (+ strand)

Cross-References

RefSeq YP_005205492.1
GI 378948004
EC Number 3.2.2.20
Entrez 11828136
INSDC AEV60097.1
NCBI Locus Tag PSF113_0062
UniParc UPI00023B3AAF
UniProtKB Acc G8PX78
UniProtKB ID G8PX78_PSEFL
UniRef100 UniRef100_G8PX78
UniRef50 UniRef50_G8PX78
UniRef90 UniRef90_G8PX78

Product

Feature Type CDS
Coding Frame 1
Product Name
nad-dependent epimerase dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -12.82
Kyte-Doolittle Hydrophobicity Value 0.132
Molecular Weight (kDa) 23484.7
Isoelectric Point (pI) 4.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 28 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003297 (337 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0062

Human Homologs

References

No references are associated with this feature.