Pseudomonas fluorescens F113, PSF113_0120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0120
Name
Replicon chromosome
Genomic location 136529 - 137869 (- strand)

Cross-References

RefSeq YP_005205553.1
GI 378948065
Entrez 11828197
INSDC AEV60158.1
NCBI Locus Tag PSF113_0120
UniParc UPI00023B3B1F
UniProtKB Acc G8PY63
UniProtKB ID G8PY63_PSEFL
UniRef100 UniRef100_G8PY63
UniRef50 UniRef50_Q88C61
UniRef90 UniRef90_Q3K4F9

Product

Feature Type CDS
Coding Frame 1
Product Name
Hemolysins-related protein containing CBS domains
Synonyms
Evidence for Translation
Charge (pH 7) -13.16
Kyte-Doolittle Hydrophobicity Value 0.184
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 596 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004927 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0120

Human Homologs

Ensembl 110, assembly GRCh38.p14
cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
E-value: 4.2e-10
Percent Identity: 26.3
Ensembl 110, assembly GRCh38.p14
cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
E-value: 4.2e-10
Percent Identity: 26.3
Ensembl 110, assembly GRCh38.p14
cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]
E-value: 4.2e-10
Percent Identity: 29.8

References

No references are associated with this feature.