Pseudomonas fluorescens F113, PSF113_0139 (trpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0139
Name
trpB
Replicon chromosome
Genomic location 150568 - 151800 (+ strand)

Cross-References

RefSeq YP_005205572.1
GI 378948084
EC Number 4.1.3.-
EC Number 4.2.1.20
Entrez 11828216
INSDC AEV60177.1
NCBI Locus Tag PSF113_0139
UniParc UPI00023B3B2F
UniProtKB Acc G8PY82
UniProtKB ID G8PY82_PSEFL
UniRef100 UniRef100_G8PY82
UniRef50 UniRef50_P07345
UniRef90 UniRef90_P07345

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TrpB
Synonyms
Evidence for Translation
Charge (pH 7) -9.32
Kyte-Doolittle Hydrophobicity Value -0.165
Molecular Weight (kDa) 44.7
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000036 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0139
Search term: trpB
Search term: protein TrpB

Human Homologs

References

No references are associated with this feature.