Pseudomonas fluorescens F113, PSF113_0591

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_0591
Name
Replicon	chromosome
Genomic location	706873 - 708363 (+ strand)

Cross-References

RefSeq	YP_005206022.1
GI	378948534
EC Number	1.2.1.-
Entrez	11828677
INSDC	AEV60627.1
NCBI Locus Tag	PSF113_0591
UniParc	UPI00023B3AC3
UniProtKB Acc	G8Q4Y0
UniProtKB ID	G8Q4Y0_PSEFL
UniRef100	UniRef100_G8Q4Y0
UniRef50	UniRef50_Q9DBF1
UniRef90	UniRef90_Q4KJ45

Product

Feature Type	CDS
Coding Frame	1
Product Name	L-pipecolate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.75
Kyte-Doolittle Hydrophobicity Value	-0.088
Molecular Weight (kDa)	53706.5
Isoelectric Point (pI)	5.24

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000989 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_0591 Search term: L-pipecolate dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000387123 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877] E-value: 1.7e-129 Percent Identity: 50.8

References