Pseudomonas fluorescens F113, PSF113_0865 (tpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0865
Name
tpiA
Replicon chromosome
Genomic location 1043445 - 1044188 (+ strand)

Cross-References

RefSeq YP_005206292.1
GI 378948804
EC Number 5.3.1.1
Entrez 11828953
INSDC AEV60897.1
NCBI Locus Tag PSF113_0865
UniParc UPI00023B40D0
UniProtKB Acc G8Q8F2
UniProtKB ID G8Q8F2_PSEFL
UniRef100 UniRef100_G8Q8F2
UniRef50 UniRef50_Q7WCQ5
UniRef90 UniRef90_Q4KIF9

Product

Feature Type CDS
Coding Frame 1
Product Name
TpiA protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.19
Kyte-Doolittle Hydrophobicity Value 0.252
Molecular Weight (kDa) 25454.0
Isoelectric Point (pI) 5.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 592 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004393 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0865
Search term: tpiA
Search term: TpiA protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 3.7e-48
Percent Identity: 46.6
Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 3.7e-48
Percent Identity: 46.6
Ensembl 110, assembly GRCh38.p14
triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
E-value: 3.7e-48
Percent Identity: 46.6

References

No references are associated with this feature.