Pseudomonas fluorescens F113, PSF113_0962

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_0962
Name
Replicon	chromosome
Genomic location	1154281 - 1155246 (- strand)

Cross-References

RefSeq	YP_005206386.1
GI	378948898
EC Number	1.1.1.29
Entrez	11829050
INSDC	AEV60991.1
NCBI Locus Tag	PSF113_0962
UniParc	UPI00023B4414
UniProtKB Acc	G8Q9F2
UniProtKB ID	G8Q9F2_PSEFL
UniRef100	UniRef100_G8Q9F2
UniRef50	UniRef50_Q4K6D3
UniRef90	UniRef90_J2Y8D6

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycerate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-0.99
Kyte-Doolittle Hydrophobicity Value	0.028
Molecular Weight (kDa)	34340.1
Isoelectric Point (pI)	6.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000893 (1006 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_0962 Search term: glycerate dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000515195 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000290921 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000422148 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000372411 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000357816 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000338615 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000410474 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000515213 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000436285 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000434630 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000515212 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000311825 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495] E-value: 2.3e-34 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000515211 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494] E-value: 2.3e-34 Percent Identity: 37.6

References