Pseudomonas fluorescens F113, PSF113_1164 (rpoS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1164
Name
rpoS
Replicon chromosome
Genomic location 1380523 - 1381530 (+ strand)

Cross-References

RefSeq YP_005206588.1
GI 378949100
Entrez 11829253
INSDC AEV61193.1
NCBI Locus Tag PSF113_1164
UniParc UPI000204176F
UniProtKB Acc G8QC28
UniProtKB ID G8QC28_PSEFL
UniRef100 UniRef100_A0A0D0SXQ6
UniRef50 UniRef50_P13445
UniRef90 UniRef90_Q4ZWP7

Product

Feature Type CDS
Coding Frame 1
Product Name
protein RpoS
Synonyms
Evidence for Translation
Charge (pH 7) -10.56
Kyte-Doolittle Hydrophobicity Value -0.484
Molecular Weight (kDa) 38.2
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002052 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1164
Search term: rpoS
Search term: protein RpoS

Human Homologs

References

No references are associated with this feature.