Pseudomonas fluorescens F113, PSF113_1202

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1202
Name
Replicon chromosome
Genomic location 1414379 - 1415077 (- strand)

Cross-References

RefSeq YP_005206626.1
GI 378949138
Entrez 11829292
INSDC AEV61231.1
NCBI Locus Tag PSF113_1202
UniParc UPI00023B4AE0
UniProtKB Acc G8QC66
UniProtKB ID G8QC66_PSEFL
UniRef100 UniRef100_G8QC66
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_A0A0D0R3F5

Product

Feature Type CDS
Coding Frame 1
Product Name
protein rcsf
Synonyms
Evidence for Translation
Charge (pH 7) 0.14
Kyte-Doolittle Hydrophobicity Value -0.049
Molecular Weight (kDa) 25697.4
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1202
Search term: protein rcsf

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 5.0e-31
Percent Identity: 49.3

References

No references are associated with this feature.