Pseudomonas fluorescens F113, PSF113_1400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1400
Name
Replicon chromosome
Genomic location 1626717 - 1627409 (+ strand)

Cross-References

RefSeq YP_005206820.1
GI 378949332
Entrez 11829489
INSDC AEV61425.1
NCBI Locus Tag PSF113_1400
UniParc UPI00023B3FCA
UniProtKB Acc G8PYD3
UniProtKB ID G8PYD3_PSEFL
UniRef100 UniRef100_G8PYD3
UniRef50 UniRef50_Q8X444
UniRef90 UniRef90_Q4KGS0

Product

Feature Type CDS
Coding Frame 1
Product Name
uracil-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7) 1.57
Kyte-Doolittle Hydrophobicity Value -0.292
Molecular Weight (kDa) 25694.2
Isoelectric Point (pI) 7.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 352 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000724 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1400

Human Homologs

Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 2.2e-63
Percent Identity: 51.9
Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 2.2e-63
Percent Identity: 51.9

References

No references are associated with this feature.