Pseudomonas fluorescens F113, PSF113_1405 (opdH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1405
Name
opdH
Replicon chromosome
Genomic location 1631654 - 1632946 (- strand)

Cross-References

RefSeq YP_005206825.1
GI 378949337
Entrez 11829494
INSDC AEV61430.1
NCBI Locus Tag PSF113_1405
UniParc UPI00023B3FCF
UniProtKB Acc G8PYD8
UniProtKB ID G8PYD8_PSEFL
UniRef100 UniRef100_G8PYD8
UniRef50 UniRef50_G8PYD8
UniRef90 UniRef90_G8PYD8

Product

Feature Type CDS
Coding Frame 1
Product Name
protein OpdH
Synonyms
Evidence for Translation
Charge (pH 7) -6.31
Kyte-Doolittle Hydrophobicity Value -0.437
Molecular Weight (kDa) 47034.7
Isoelectric Point (pI) 5.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1405
Search term: opdH
Search term: protein OpdH

Human Homologs

References

No references are associated with this feature.