Pseudomonas fluorescens F113, PSF113_2005 (rbsA)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_2005
Name	rbsA
Replicon	chromosome
Genomic location	2352261 - 2353814 (+ strand)

Cross-References

RefSeq	YP_005207412.1
GI	378949924
Entrez	11830097
INSDC	AEV62017.1
NCBI Locus Tag	PSF113_2005
UniParc	UPI00023B4109
UniProtKB Acc	G8Q6E3
UniProtKB ID	G8Q6E3_PSEFL
UniRef100	UniRef100_G8Q6E3
UniRef50	UniRef50_D7HZ02
UniRef90	UniRef90_Q4KEX3

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein RbsA
Synonyms
Evidence for Translation
Charge (pH 7)	-14.68
Kyte-Doolittle Hydrophobicity Value	0.064
Molecular Weight (kDa)	55654.3
Isoelectric Point (pI)	4.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000134 (908 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_2005 Search term: rbsA Search term: protein RbsA

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000374312 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 1.3e-10 Percent Identity: 25.1
Ensembl 110, assembly GRCh38.p14	ENSP00000272895 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 1.3e-10 Percent Identity: 25.1

References