Pseudomonas fluorescens F113, PSF113_2016

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_2016
Name
Replicon	chromosome
Genomic location	2360606 - 2362528 (+ strand)

Cross-References

RefSeq	YP_005207423.1
GI	378949935
EC Number	6.1.1.3
Entrez	11830108
INSDC	AEV62028.1
NCBI Locus Tag	PSF113_2016
UniParc	UPI00023B4111
UniProtKB Acc	G8Q6F4
UniProtKB ID	G8Q6F4_PSEFL
UniRef100	UniRef100_G8Q6F4
UniRef50	UniRef50_Q83C10
UniRef90	UniRef90_Q48JS3

Product

Feature Type	CDS
Coding Frame	1
Product Name	Threonyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-11.87
Kyte-Doolittle Hydrophobicity Value	-0.393
Molecular Weight (kDa)	72.6
Isoelectric Point (pI)	5.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002827 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_2016 Search term: Threonyl-tRNA synthetase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000424387 threonyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:11572] E-value: 3.1e-131 Percent Identity: 39.1
Ensembl 110, assembly GRCh38.p14	ENSP00000265112 threonyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:11572] E-value: 3.1e-131 Percent Identity: 39.1

References