Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
Locus Tag |
PSF113_2170
|
Name |
cspD
|
Replicon | chromosome |
Genomic location | 2544379 - 2544648 (- strand) |
RefSeq | YP_005207576.1 |
GI | 378950088 |
Entrez | 11830263 |
INSDC | AEV62181.1 |
NCBI Locus Tag | PSF113_2170 |
UniParc | UPI00023B4592 |
UniProtKB Acc | G8Q8P3 |
UniProtKB ID | G8Q8P3_PSEFL |
UniRef100 | UniRef100_G8Q8P3 |
UniRef50 | UniRef50_P0A970 |
UniRef90 | UniRef90_G8Q8P3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
protein CspD
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 1.70 |
Kyte-Doolittle Hydrophobicity Value | -0.081 |
Molecular Weight (kDa) | 9771.2 |
Isoelectric Point (pI) | 8.97 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 495 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002930 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_2170
Search term: cspD
Search term: protein CspD
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
1.8e-08
Percent Identity:
37.0
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
1.8e-08
Percent Identity:
37.0
|
Ensembl
110, assembly
GRCh38.p14
|
lin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]
E-value:
1.8e-08
Percent Identity:
37.0
|