Pseudomonas fluorescens F113, PSF113_2705

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_2705
Name
Replicon	chromosome
Genomic location	3174534 - 3176021 (- strand)

Cross-References

RefSeq	YP_005208104.1
GI	378950616
EC Number	2.7.1.17
Entrez	11830798
INSDC	AEV62709.1
NCBI Locus Tag	PSF113_2705
UniParc	UPI00023B45AE
UniProtKB Acc	G8PZN9
UniProtKB ID	G8PZN9_PSEFL
UniRef100	UniRef100_G8PZN9
UniRef50	UniRef50_P44401
UniRef90	UniRef90_J2MRX8

Product

Feature Type	CDS
Coding Frame	1
Product Name	Xylulose kinase
Synonyms
Evidence for Translation
Charge (pH 7)	-11.96
Kyte-Doolittle Hydrophobicity Value	0.037
Molecular Weight (kDa)	52205.6
Isoelectric Point (pI)	5.35

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 481 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003172 (882 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_2705 Search term: Xylulose kinase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000461416 novel readthrough SHPK-TRPV1 protein E-value: 5.0e-12 Percent Identity: 24.6
Ensembl 110, assembly GRCh38.p14	ENSP00000225519 sedoheptulokinase [Source:HGNC Symbol;Acc:HGNC:1492] E-value: 5.0e-12 Percent Identity: 24.6

References